I think it takes a bit of creativity to get it all to work but I am sure there is a way you around it.
My mini currently has a 1pc "Lift Up" style flip front like this...

Problem is all of the fixings are visible from the outside and i can't open just the bonnet which is sort of annoying when all you want to do is fill the washer bottle up!
I have bought a 2pc front end which I am going to fit but it will not be a flip front. The bonnet will open as normal and the front will be removable for when I need to work on the engine and like you plan, all of my fixings will not be visible from the outside.
The areas which i have attached fixings to I have done along the basis of...
I have built the area up with a few layers of fiberglass (on the inside) i have then drilled holes in the fibreglass and in the fitting (which is fitted to the inside of the flip front).
i have then countersunk the holes which I have drilled (Hence having to build the F/G up on the inside for extra support) and pop riveted the fixings in place)
Having countersunk the holes allows me to fill the rivet holes with resin and prep these areas, primer and paint over them with them not being visible.
Applying the fixings to the inside of the flip front with some tiger seal, resin and sheet fiberglass also adds to their rigidity.
hopefully some of that above makes some sort of sense, if not i will get some photos for you, although what I am trying to get at is you will be able to fix your front end with no effect to the nose of your mini.
As for having the A-Panel built into your flip front I am not to sure how you will be able to make that flip because as you say, it will catch everything on the way up.
I hope that in all of that text up there some of it helps you out in some way!
Good luck!