The Micra gearing isn't badly enough affected to worry about - they came with 13" or 14" wheels as standard with not much higher profile tyres than the Mini so it's not like sticking a V-Tec in there from a car with 15"-17" wheels as standard.
You don't need to mess with the inner wings to fit a Micra lump. If you want to use the standard Micra intake then you need a bulge in the bulkhead crossmember but if you mdify the Micra's intake then that can be avoided. As I said in the other thread it would be perfectly possible to stick a Micra engine and box into a Mini and then convert back at a later date leaving no evidence that it had ever happened.
Iain